Lucas, Spencer G., Spielmann, Justin A., Hunt, Adrian P., and Emry, Robert J. 2012. "Crocodylian coprolites from the Eocene of the Zaysan Basin, Kasakstan." New Mexico Museum of Natural History and Science, Vertebrate Coprolites, 57 319–324.
New cranial material of Notharctus (Mammalia, Primates, Notharctidae) from the Sheep Pass Formation, Elderberry Canyon, Nevada, with implications for incisor morphology and paleogeography of notharctine primates
Skeletal anatomy of the basicranium and auditory region in the metacheiromyid palaeanodont Metacheiromys (Mammalia, Pholidotamorpha) based on high-resolution CT scans
An exquisitely preserved skeleton of Eoarctos vorax (nov. gen. et sp.) from Fitterer Ranch, North Dakota (early Oligocene) and systematics and phylogeny of North American early arctoids (Carnivora, Caniformia)
Emry, Robert J. 2002. "Preface." In Cenozoic Mammals of Land and Sea: Tributes to the Career of Clayton E. Ray. v. Washington, D.C.: Smithsonian Institution. In Smithsonian Contributions to Paleobiology, 93.
Eshelman, Ralph E., Emry, Robert J., Domning, Daryl P., and Bohaska, David J. 2002. "Biography and Bibliography of Clayton Edward Ray." In Cenozoic Mammals of Land and Sea: Tributes to the Career of Clayton E. Ray. Emry, Robert J., editor. 1–13. Smithsonian Institution. In Smithsonian Contributions to Paleobiology, 93.
Emry, Robert J. and Thorington, Richard W., Jr. 1984. "The tree squirrel Sciurus (Sciuridae, Rodentia) as a living fossil." In Living Fossils. Eldredge, N. and Stanley, S. M., editors. 23–31. New York: Springer-Verlag.
Emry, Robert J. 1984. "[Review] "Mammalian Paleofaunas of the World." By D. E. Savage and D. E. Russell." Journal of Vertebrate Paleontology, 3, (3) 183–185.
Emry, Robert J. 1981. "Additions to the Mammalian Fauna of the Type Duchesnean, with Comments on the Status of the Duchesnean Age." Journal of Paleontology, 55, (3) 563–570.
Emry, Robert J. and Prothero, Donald R., editors. 1996. The Terrestrial Eocene-Oligocene Transition in North America. Cambridge, United Kingdom: Cambridge University Press. https://doi.org/10.1017/CBO9780511665431.001.
Emry, Robert J. 1987. [Book review] "Mammal fossil record incompletely drawn: A review of Mammal evolution: An illustrated guide, by R.J.G. Savage and M.R. Long." Naturalist review, 3.
Gaudin, T. J., Emry, Robert J., and Pogue, B. 2006. "A new genus and species of Pangolin (Mammalia, Pholidota) from the late Eocene of Inner Mongolia, China." Journal of Vertebrate Paleontology, 26, (1) 146–159. https://doi.org/10.1671/0272-4634(2006)26[146:ANGASO]2.0.CO;2.
Emry, Robert J. and Korth, William W. 2007. "A new genus of squirrel (Rodentia, Sciuridae) from the mid-Cenozoic of North America." Journal of Vertebrate Paleontology, 27, (3) 693–698. https://doi.org/10.1671/0272-4634(2007)27[693:ANGOSR]2.0.CO;2.
Emry, Robert J. 1981. "New Material of the Oligocene Muroid Rodent Nonomys, and Its Bearing on Muroid Origins." American Museum Novitates, (2712) 1–14.
Pipestoneomyidae, a New Family of Fossil Rodents (Mammalia) from the Duchesnean (Late Middle Eocene, Bartonian) to Orellan (Early Oligocene, Priabonian) of North America
